Paket: murasaki-mpi (1.68.6-13 och andra) [debports]
Länkar för murasaki-mpi
Debianresurser:
Hämta källkodspaketet :
Hittades ejAnsvariga:
Externa resurser:
- Hemsida [murasaki.dna.bio.keio.ac.jp]
Liknande paket:
homology detection tool across multiple large genomes (MPI-version)
Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction
This package provides the MPI-enabled binary for murasaki. While this will speed up operation on multi-processor machines it will slow down on a single processor.
Andra paket besläktade med murasaki-mpi
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- dep: libboost-filesystem1.83.0 (>= 1.83.0)
- filesystem operations (portable paths, iteration over directories, etc) in C++
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- dep: libboost-iostreams1.83.0 (>= 1.83.0)
- Boost.Iostreams Library
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- dep: libc6 (>= 2.34)
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC stödbibliotek
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- dep: libopenmpi3t64 (>= 4.1.6)
- high performance message passing library -- shared library
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- dep: libstdc++6 (>= 13.1)
- GNU standardbibliotek v3 för C++
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- dep: murasaki-common
- homology detection tool across multiple large genomes (common files)
Hämta murasaki-mpi
Arkitektur | Version | Paketstorlek | Installerad storlek | Filer |
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ppc64 (inofficiell anpassning) | 1.68.6-13+b5 | 715,8 kbyte | 7.143,0 kbyte | [filförteckning] |