Paket: garlic (1.6-3 och andra)

[ Källkod: garlic  ]

visualization program for biomolecules

Garlic is written for the investigation of membrane proteins. It may be used to visualize other proteins, as well as some geometric objects. This version of garlic recognizes PDB format version 2.1. Garlic may also be used to analyze protein sequences.

It only depends on the X libraries, no other libraries are needed.

Features include:

 - The slab position and thickness are visible in a small window.
 - Atomic bonds as well as atoms are treated as independent drawable
   objects.
 - The atomic and bond colors depend on position. Five mapping modes
   are available (as for slab).
 - Capable to display stereo image.
 - Capable to display other geometric objects, like membrane.
 - Atomic information is available for atom covered by the mouse
   pointer. No click required, just move the mouse pointer over the
   structure!
 - Capable to load more than one structure.
 - Capable to draw Ramachandran plot, helical wheel, Venn diagram,
   averaged hydrophobicity and hydrophobic moment plot.
 - The command prompt is available at the bottom of the main window.
   It is able to display one error message and one command string.

Märken: Field: Biologi, Chemistry, User Interface: interface::commandline, interface::graphical, X Window System, Role: Program, Scope: scope::utility, uitoolkit::xlib, Purpose: Data Visualization, X Window System: Application

Andra paket besläktade med garlic

• dep: libc6 (>= 2.11) [hppa]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.14) [amd64]

  dep: libc6 (>= 2.16) [x32]

  dep: libc6 (>= 2.17) [ppc64el]

  dep: libc6 (>= 2.28) [sh4]

  dep: libc6 (>= 2.34) [arm64, riscv64]

  dep: libc6 (>= 2.7) [armel, armhf, i386, m68k, mips64el, ppc64, s390x, sparc64]

• dep: libc6.1 (>= 2.28) [ia64]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6.1-udeb

  dep: libc6.1 (>= 2.7) [alpha]

• dep: libx11-6

  X11 client-side library

• sug: garlic-doc

  [Chemistry] a molecular visualization program - documents

• sug: openbabel

  Chemical toolbox utilities (cli)

Hämta garlic

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
alpha (inofficiell anpassning)	1.6-3	231,8 kbyte	961,0 kbyte	[filförteckning]
amd64	1.6-3+b1	218,3 kbyte	833,0 kbyte	[filförteckning]
arm64	1.6-3+b1	206,5 kbyte	792,0 kbyte	[filförteckning]
armel	1.6-3	200,0 kbyte	764,0 kbyte	[filförteckning]
armhf	1.6-3	191,2 kbyte	596,0 kbyte	[filförteckning]
hppa (inofficiell anpassning)	1.6-3	205,2 kbyte	746,0 kbyte	[filförteckning]
i386	1.6-3	212,6 kbyte	868,0 kbyte	[filförteckning]
ia64 (inofficiell anpassning)	1.6-3	263,8 kbyte	1.400,0 kbyte	[filförteckning]
m68k (inofficiell anpassning)	1.6-3	190,1 kbyte	740,0 kbyte	[filförteckning]
mips64el	1.6-3	213,1 kbyte	909,0 kbyte	[filförteckning]
ppc64 (inofficiell anpassning)	1.6-3	230,6 kbyte	984,0 kbyte	[filförteckning]
ppc64el	1.6-3	257,4 kbyte	1.176,0 kbyte	[filförteckning]
riscv64	1.6-3+b1	230,4 kbyte	708,0 kbyte	[filförteckning]
s390x	1.6-3	188,4 kbyte	788,0 kbyte	[filförteckning]
sh4 (inofficiell anpassning)	1.6-3	259,7 kbyte	756,0 kbyte	[filförteckning]
sparc64 (inofficiell anpassning)	1.6-3	190,7 kbyte	787,0 kbyte	[filförteckning]
x32 (inofficiell anpassning)	1.6-3	216,5 kbyte	800,0 kbyte	[filförteckning]