Paket: r-bioc-shortread (1.64.0-1)
Länkar för r-bioc-shortread
Debianresurser:
Hämta källkodspaketet r-bioc-shortread:
- [r-bioc-shortread_1.64.0-1.dsc]
- [r-bioc-shortread_1.64.0.orig.tar.gz]
- [r-bioc-shortread_1.64.0-1.debian.tar.xz]
Ansvariga:
Externa resurser:
- Hemsida [bioconductor.org]
Liknande paket:
Experimentellt paket
Varning: Paketet är från den experimentella utgåvan. Det innebär att det med stor sannolikhet är instabilt eller innehåller fel, och kanske till och med kan orsaka dataförluster. Se till att läsa ändringsloggen och annan dokumentation innan du använder det.
GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.
Andra paket besläktade med r-bioc-shortread
|
|
|
|
-
- dep: libc6 (>= 2.14)
- GNU C-bibliotek: Delade bibliotek
också ett virtuellt paket som tillhandahålls av libc6-udeb
-
- dep: libgcc-s1 (>= 3.0)
- GCC stödbibliotek
-
- dep: libstdc++6 (>= 11)
- GNU standardbibliotek v3 för C++
-
- dep: r-api-4.0
- Paketet inte tillgängligt
-
- dep: r-api-bioc-3.20
- virtuellt paket som tillhandahålls av r-bioc-biocgenerics
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.23.3)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.47.6)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomeinfodb (>= 1.15.2)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicalignments (>= 1.15.6)
- BioConductor representation and manipulation of short genomic alignments
-
- dep: r-bioc-genomicranges (>= 1.31.8)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.13.12)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-pwalign
- Perform pairwise sequence alignments
-
- dep: r-bioc-rhtslib
- HTSlib high-throughput sequencing library as GNU R package
-
- dep: r-bioc-rsamtools (>= 1.31.2)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-s4vectors (>= 0.17.25)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-bioc-xvector
- BioConductor representation and manpulation of external sequences
-
- dep: r-cran-hwriter
- HTML Writer - Outputs R objects in HTML format
-
- dep: r-cran-lattice
- GNU R package for 'Trellis' graphics
-
- dep: r-cran-latticeextra
- GNU R package of additional graphical displays based on lattice
-
- dep: zlib1g (>= 1:1.1.4)
- Kompressionsbibliotek - körtidspaket
-
- sug: r-bioc-biocstyle
- standard styles for vignettes and other Bioconductor documents
-
- sug: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
-
- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- sug: r-cran-knitr
- GNU R package for dynamic report generation using Literate Programming
-
- sug: r-cran-runit
- GNU R package providing unit testing framework
Hämta r-bioc-shortread
Arkitektur | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|
amd64 | 5.093,7 kbyte | 8.206,0 kbyte | [filförteckning] |