Paket: zalign (0.9.1-4)

[ Källkod: zalign  ]

parallel local alignment of biological sequences

zAlign is a local sequence aligner, especially intended for use with large biological DNA sequences, with more than 1Mbp (Millions of base pairs). It uses the Smith-Waterman exact algorithm with affine gap cost function to perform this task.

zAlign can be used both in distributed (clusters, for example) or standalone environments. Currently it has been tested on Linux and Sun Solaris, using both the MPICH (http://www.mcs.anl.gov/research/projects/mpi/mpich1/) and OpenMPI (http://www.open-mpi.org/) implementations. Ports for other Unix-like environments are highly considered.

Andra paket besläktade med zalign

• dep: libc6 (>= 2.14) [amd64]

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

  dep: libc6 (>= 2.17) [arm64]

  dep: libc6 (>= 2.4) [armhf, i386]

• dep: libgcc1 (>= 1:3.0) [ej armhf]

  GCC stödbibliotek

  dep: libgcc1 (>= 1:3.5) [armhf]

• dep: libopenmpi3

  high performance message passing library -- shared library

• dep: libstdc++6 (>= 4.9)

  GNU standardbibliotek v3 för C++

Hämta zalign

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	47,1 kbyte	279,0 kbyte	[filförteckning]
arm64	44,7 kbyte	263,0 kbyte	[filförteckning]
armhf	26,1 kbyte	97,0 kbyte	[filförteckning]
i386	47,9 kbyte	265,0 kbyte	[filförteckning]