Paket: mauve-aligner (2.4.0+4736-1)
Länkar för mauve-aligner
Debianresurser:
Hämta källkodspaketet mauve-aligner:
- [mauve-aligner_2.4.0+4736-1.dsc]
- [mauve-aligner_2.4.0+4736.orig.tar.xz]
- [mauve-aligner_2.4.0+4736-1.debian.tar.xz]
Ansvariga:
Externa resurser:
- Hemsida [darlinglab.org]
Liknande paket:
multiple genome alignment
Mauve is a system for efficiently constructing multiple genome alignments in the presence of large-scale evolutionary events such as rearrangement and inversion. Multiple genome alignment provides a basis for research into comparative genomics and the study of evolutionary dynamics. Aligning whole genomes is a fundamentally different problem than aligning short sequences.
Mauve has been developed with the idea that a multiple genome aligner should require only modest computational resources. It employs algorithmic techniques that scale well in the amount of sequence being aligned. For example, a pair of Y. pestis genomes can be aligned in under a minute, while a group of 9 divergent Enterobacterial genomes can be aligned in a few hours.
Mauve computes and interactively visualizes genome sequence comparisons. Using FastA or GenBank sequence data, Mauve constructs multiple genome alignments that identify large-scale rearrangement, gene gain, gene loss, indels, and nucleotide substutition.
Mauve is developed at the University of Wisconsin.
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Hämta mauve-aligner
Arkitektur | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|
i386 | 479,9 kbyte | 546,0 kbyte | [filförteckning] |