Paket: tabix (1.11-4)

[ Källkod: htslib  ]

generic indexer for TAB-delimited genome position files

Tabix indexes files where some columns indicate sequence coordinates: name (usually a chromosome), start and stop. The input data file must be position sorted and compressed by bgzip (provided in this package), which has a gzip like interface. After indexing, tabix is able to quickly retrieve data lines by chromosomal coordinates. Fast data retrieval also works over network if an URI is given as a file name.

This package is built from the HTSlib source, and provides the bgzip, htsfile, and tabix tools.

Märken: Implemented in: C, Role: Program, Vetenskap: science::calculation, use::calculating, Supports Format: HTML, Hypertext Markup Language, Works with: Text

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Arkitektur	Paketstorlek	Installerad storlek	Filer
mipsel	327,7 kbyte	1.215,0 kbyte	[filförteckning]