Paket: python3-pairtools-examples (1.0.2-2 och andra)

[ Källkod: pairtools  ]

Process sequencing data from a Hi-C experiment (examples)

Simple and fast command-line framework to process sequencing data from a Hi-C experiment.

Process pair-end sequence alignments and perform the following operations:

  - Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end
    sequences of Hi-C DNA molecules
  - Sort .pairs files for downstream analyses
  - Detect, tag and remove PCR/optical duplicates
  - Generate extensive statistics of Hi-C datasets
  - Select Hi-C pairs given flexibly defined criteria
  - Restore .sam alignments from Hi-C pairs

This package contains some examples

Andra paket besläktade med python3-pairtools-examples

• enh: python3-pairtools

  Framework to process sequencing data from a Hi-C experiment

Hämta python3-pairtools-examples

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
mips64el	1.0.2-2+b1	484,1 kbyte	539,0 kbyte	[filförteckning]