Paket: macs (2.2.7.1-6 och andra)

[ Källkod: macs  ]

Model-based Analysis of ChIP-Seq on short reads sequencers

MACS empirically models the length of the sequenced ChIP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. MACS compares favorably to existing ChIP-Seq peak-finding algorithms, is publicly available open source, and can be used for ChIP-Seq with or without control samples.

Andra paket besläktade med macs

• dep: libc6 (>= 2.4)

  GNU C-bibliotek: Delade bibliotek
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.12)

  dep: python3 (>= 3.11~)

• dep: python3-numpy

  Fast array facility to the Python 3 language

Hämta macs

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Version	Paketstorlek	Installerad storlek	Filer
i386	2.2.7.1-6+b1	2.457,5 kbyte	5.963,0 kbyte	[filförteckning]