Paket: macs (2.2.7.1-6 und andere)

[ Quellcode: macs  ]

Model-based Analysis of ChIP-Seq on short reads sequencers

MACS empirically models the length of the sequenced ChIP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. MACS compares favorably to existing ChIP-Seq peak-finding algorithms, is publicly available open source, and can be used for ChIP-Seq with or without control samples.

Andere Pakete mit Bezug zu macs

• dep: libc6 (>= 2.4)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.12)

  dep: python3 (>= 3.11~)

• dep: python3-numpy

  Schnelle Array-Einrichtung für die Sprache Python 3

macs herunterladen

Download für alle verfügbaren Architekturen

Architektur	Version	Paketgröße	Größe (installiert)	Dateien
i386	2.2.7.1-6+b1	2.457,5 kB	5.963,0 kB	[Liste der Dateien]