Balík: r-bioc-genomicfiles (1.40.0+dfsg-1)

[ Zdroj: r-bioc-genomicfiles  ]

Distributed computing by file or by range

This package provides infrastructure for parallel computations distributed 'by file' or 'by range'. User defined MAPPER and REDUCER functions provide added flexibility for data combination and manipulation.

Ostatné balíky súvisiace s balíkom r-bioc-genomicfiles

• dep: r-api-4.0

  virtuálny balík poskytovaný balíkom r-base-core

• dep: r-api-bioc-3.19

  virtuálny balík poskytovaný balíkom r-bioc-biocgenerics

• dep: r-bioc-biocgenerics (>= 0.50.0)

  generic functions for Bioconductor

• dep: r-bioc-biocparallel (>= 1.38.0)

  BioConductor facilities for parallel evaluation

• dep: r-bioc-genomeinfodb (>= 1.40.1)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicalignments (>= 1.40.0)

  BioConductor representation and manipulation of short genomic alignments

• dep: r-bioc-genomicranges (>= 1.56.1)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.38.1)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-matrixgenerics (>= 1.16.0)

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-rsamtools (>= 2.20.0)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-rtracklayer (>= 1.64.0)

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.42.1)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment (>= 1.34.0)

  BioConductor assay container

• dep: r-bioc-variantannotation (>= 1.50.0)

  BioConductor annotation of genetic variants

• sug: r-bioc-biocstyle (>= 2.32.1)

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-biostrings (>= 2.72.1)

  GNU R string objects representing biological sequences

• sug: r-bioc-genefilter (>= 1.86.0)

  methods for filtering genes from microarray experiments

• sug: r-bioc-snpstats (>= 1.54.0)

  BioConductor SnpMatrix and XSnpMatrix classes and methods

• sug: r-cran-knitr

  balík GNU R na dynamickú tvorbu zostáv pomocou Literate Programming

• sug: r-cran-runit

  GNU R package providing unit testing framework

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Architektúra	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
all	528.9 kB	784.0 kB	[zoznam súborov]