Balík: libssw0 (1.1-15 a iné)

[ Zdroj: libssw  ]

fast SIMD parallelized implementation of the Smith-Waterman algorithm

SSW is a fast implementation of the Smith-Waterman algorithm, which uses the Single-Instruction Multiple-Data (SIMD) instructions to parallelize the algorithm at the instruction level. SSW library provides an API that can be flexibly used by programs written in C, C++ and other languages. The library can do protein and genome alignment directly. Current version of this implementation is ~50 times faster than an ordinary Smith-Waterman. It can return the Smith-Waterman score, alignment location and traceback path (cigar) of the optimal alignment accurately; and return the sub-optimal alignment score and location heuristically.

Značky: Role: Shared Library

Ostatné balíky súvisiace s balíkom libssw0

• dep: libc6 (>= 2.4)

  knižnica GNU C - zdieľané knižnice
  tiež virtuálny balík poskytovaný balíkom libc6-udeb

• dep: libgcc-s1 (>= 3.5)

  podporná knižnica GCC

• dep: libstdc++6 (>= 11)

  štandardná knižnica C++ GNU v3

• dep: zlib1g

  komprimačná knižnica - dynamická verzia

Stiahnuť libssw0

Stiahnuť pre všetky dostupné architektúry

Architektúra	Verzia	Veľkosť balíka	Nainštalovaná veľkosť	Súbory
armel	1.1-15+b1	20.8 kB	60.0 kB	[zoznam súborov]