[ Zdroj: r-bioc-shortread ]
Balík: r-bioc-shortread (1.62.0-1)
Odkazy pre r-bioc-shortread
Zdroje Debian:
Stiahnuť zdrojový balík r-bioc-shortread:
- [r-bioc-shortread_1.62.0-1.dsc]
- [r-bioc-shortread_1.62.0.orig.tar.gz]
- [r-bioc-shortread_1.62.0-1.debian.tar.xz]
Správcovia:
Externé zdroje:
- Domovská stránka [bioconductor.org]
Podobné balíky:
GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.
Ostatné balíky súvisiace s balíkom r-bioc-shortread
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- dep: libc6 (>= 2.7)
- knižnica GNU C - zdieľané knižnice
tiež virtuálny balík poskytovaný balíkom libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- podporná knižnica GCC
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- dep: libstdc++6 (>= 11)
- štandardná knižnica C++ GNU v3
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- dep: r-api-4.0
- virtuálny balík poskytovaný balíkom r-base-core
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- dep: r-api-bioc-3.19
- virtuálny balík poskytovaný balíkom r-bioc-biocgenerics
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- dep: r-bioc-biobase (>= 2.64.0)
- base functions for Bioconductor
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- dep: r-bioc-biocgenerics (>= 0.50.0)
- generic functions for Bioconductor
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- dep: r-bioc-biocparallel (>= 1.38.0)
- BioConductor facilities for parallel evaluation
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- dep: r-bioc-biostrings (>= 2.72.1)
- GNU R string objects representing biological sequences
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- dep: r-bioc-genomeinfodb (>= 1.40.1)
- BioConductor utilities for manipulating chromosome identifiers
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- dep: r-bioc-genomicalignments (>= 1.40.0)
- BioConductor representation and manipulation of short genomic alignments
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- dep: r-bioc-genomicranges (>= 1.56.1)
- BioConductor representation and manipulation of genomic intervals
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- dep: r-bioc-iranges (>= 2.38.1)
- GNU R low-level containers for storing sets of integer ranges
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- dep: r-bioc-pwalign (>= 1.0.0-2~0exp1)
- Perform pairwise sequence alignments
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- dep: r-bioc-rhtslib (>= 3.0.0)
- HTSlib high-throughput sequencing library as GNU R package
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- dep: r-bioc-rsamtools (>= 2.20.0)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
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- dep: r-bioc-s4vectors (>= 0.42.1)
- BioConductor S4 implementation of vectors and lists
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- dep: r-bioc-xvector (>= 0.44.0)
- BioConductor representation and manpulation of external sequences
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- dep: r-bioc-zlibbioc (>= 1.50.0)
- (Virtual) zlibbioc Bioconductor package
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- dep: r-cran-hwriter
- HTML Writer - Outputs R objects in HTML format
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- dep: r-cran-lattice
- balík GNU R pre grafiku „Trellis“
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- dep: r-cran-latticeextra
- balík GNU R s ďalšími grafickými zobrazeniami založenými na mriežke
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- dep: zlib1g (>= 1:1.1.4)
- komprimačná knižnica - dynamická verzia
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- sug: r-bioc-biocstyle (>= 2.32.1)
- standard styles for vignettes and other Bioconductor documents
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- sug: r-bioc-biomart (>= 2.60.1)
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
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- sug: r-bioc-genomicfeatures (>= 1.56.0)
- GNU R tools for making and manipulating transcript centric annotations
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- sug: r-cran-knitr
- balík GNU R na dynamickú tvorbu zostáv pomocou Literate Programming
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- sug: r-cran-runit
- GNU R package providing unit testing framework
Stiahnuť r-bioc-shortread
Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
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mips64el | 5,088.5 kB | 8,266.0 kB | [zoznam súborov] |