Пакет: chromhmm-example (1.25+dfsg-1)
Ссылки для chromhmm-example
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Исходный код chromhmm:
Сопровождающие:
Внешние ресурсы:
- Сайт [compbio.mit.edu]
Подобные пакеты:
Chromatin state discovery and characterization (example)
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to discover de novo the major re-occuring combinatorial and spatial patterns of marks. ChromHMM is based on a multivariate Hidden Markov Model that explicitly models the presence or absence of each chromatin mark. The resulting model can then be used to systematically annotate a genome in one or more cell types. By automatically computing state enrichments for large-scale functional and annotation datasets ChromHMM facilitates the biological characterization of each state. ChromHMM also produces files with genome-wide maps of chromatin state annotations that can be directly visualized in a genome browser.
This package provides example to work with ChromHMM.
Другие пакеты, относящиеся к chromhmm-example
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- enh: chromhmm
- Chromatin state discovery and characterization
Загрузка chromhmm-example
Архитектура | Размер пакета | В установленном виде | Файлы |
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all | 43 967,1 Кб | 44 191,0 Кб | [список файлов] |