Пакет: snippy-examples (4.6.0+dfsg-5)

[ Источник: snippy  ]

rapid haploid variant calling and core genome alignment (examples)

Snippy finds SNPs between a haploid reference genome and your NGS sequence reads. It will find both substitutions (snps) and insertions/deletions (indels). It will use as many CPUs as you can give it on a single computer (tested to 64 cores). It is designed with speed in mind, and produces a consistent set of output files in a single folder. It can then take a set of Snippy results using the same reference and generate a core SNP alignment (and ultimately a phylogenomic tree).

This package contains example data to test snippy.

Другие пакеты, относящиеся к snippy-examples

• rec: snippy

  rapid haploid variant calling and core genome alignment

Загрузка snippy-examples

Загрузить для всех доступных архитектур

Архитектура	Размер пакета	В установленном виде	Файлы
all	303,2 Кб	313,0 Кб	[список файлов]