Pacote: sibelia (3.0.7+dfsg-3 e outros)

[ Fonte: sibelia  ]

comparative genomics tool

Sibelia (Synteny Block ExpLoration tool) is a comparative genomics tool: It assists biologists in analysing the genomic variations that correlate with pathogens, or the genomic changes that help microorganisms adapt in different environments. Sibelia will also be helpful for the evolutionary and genome rearrangement studies for multiple strains of microorganisms.

Sibelia is useful in finding:

 1) shared regions,
 2) regions that present in one group of genomes but not in others,
 3) rearrangements that transform one genome to other genomes.

Outros pacotes relacionados a sibelia

• dep: lagan

  highly parametrizable pairwise global genome sequence aligner

• dep: libc6 (>= 2.14) [amd64]

  GNU Biblioteca C: Bibliotecas compartilhadas
  também um pacote virtual fornecido por libc6-udeb

  dep: libc6 (>= 2.17) [ppc64el]

  dep: libc6 (>= 2.34) [arm64, riscv64]

  dep: libc6 (>= 2.4) [não amd64, arm64, ppc64el, riscv64]

• dep: libdivsufsort3 (>= 2.0.1)

  fast suffix array construction

• dep: libgcc-s1 (>= 3.0) [não armel, armhf, riscv64]

  Biblioteca de suporte GCC

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 14) [arm64, riscv64]

  Biblioteca C++ padrão da GNU v3

  dep: libstdc++6 (>= 9) [não arm64, riscv64]

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• sug: sibelia-examples

  comparative genomics tool (example data)

Download de sibelia

Baixe para todas as arquiteturas disponíveis

Arquitetura	Versão	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	3.0.7+dfsg-3	309.7 kB	1,176.0 kB	[lista de arquivos]
arm64	3.0.7+dfsg-3+b2	293.4 kB	1,229.0 kB	[lista de arquivos]
armel	3.0.7+dfsg-3	283.4 kB	1,139.0 kB	[lista de arquivos]
armhf	3.0.7+dfsg-3	289.5 kB	955.0 kB	[lista de arquivos]
i386	3.0.7+dfsg-3	312.3 kB	1,151.0 kB	[lista de arquivos]
mips64el	3.0.7+dfsg-3	278.1 kB	1,250.0 kB	[lista de arquivos]
ppc64el	3.0.7+dfsg-3	305.1 kB	1,228.0 kB	[lista de arquivos]
riscv64	3.0.7+dfsg-3+b2	309.2 kB	1,057.0 kB	[lista de arquivos]
s390x	3.0.7+dfsg-3	275.7 kB	1,128.0 kB	[lista de arquivos]