Pacote: beagle (241217-3)

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Pagina principal [faculty.washington.edu]

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Genotype calling, genotype phasing and imputation of ungenotyped markers

Beagle performs genotype calling, genotype phasing, imputation of ungenotyped markers, and identity-by-descent segment detection. Genotypic imputation works on phased haplotypes using a Li and Stephens haplotype frequency model. Beagle also implements the Refined IBD algorithm for detecting homozygosity-by-descent (HBD) and identity-by-descent (IBD) segments.

Etiquetas: Campo: Biologia, Bioinformática, Implementado em: implemented-in::java, interface::commandline, Função: Programa, Propósito: Análise

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sug: beagle-doc

Documentation for Beagle

Download de beagle

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