Pacote: clustalx (2.1+lgpl-9 e outros)

[ Fonte: clustalx  ]

Multiple alignment of nucleic acid and protein sequences (graphical interface)

This package offers a GUI interface for the Clustal multiple sequence alignment program. It provides an integrated environment for performing multiple sequence- and profile-alignments to analyse the results. The sequence alignment is displayed in a window on the screen. A versatile coloring scheme has been incorporated to highlight conserved features in the alignment. For professional presentations, one should use the texshade LaTeX package or boxshade.

The pull-down menus at the top of the window allow you to select all the options required for traditional multiple sequence and profile alignment. You can cut-and-paste sequences to change the order of the alignment; you can select a subset of sequences to be aligned; you can select a sub-range of the alignment to be realigned and inserted back into the original alignment.

An alignment quality analysis can be performed and low-scoring segments or exceptional residues can be highlighted.

Etiquetas: Biologia: Clustal/ALN, Proteínas, Campo: field::biology, field::biology:bioinformatics, Implementado em: implemented-in::c, interface::commandline, Interface de usuário(a): Graphical User Interface, interface::x11, role::program, Alcance: Utilitários, Kit de ferramentas de interface: Lesstif/Motif, uitoolkit::qt, use::analysing, Propósito: Comparação, use::viewing, works-with-format::plaintext, Funciona com: Precisa de uma etiqueta extra, Sistema de janelas X: Aplicativos

Outros pacotes relacionados a clustalx

• dep: libc6 (>= 2.34) [não arm64]

  GNU Biblioteca C: Bibliotecas compartilhadas
  também um pacote virtual fornecido por libc6-udeb

  dep: libc6 (>= 2.38) [arm64]

• dep: libgcc-s1 (>= 3.0) [não armel, armhf, riscv64]

  Biblioteca de suporte GCC

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libqt5core5t64 (>= 5.15.1) [amd64, i386]

  Qt 5 core module

  dep: libqt5core5t64 (>= 5.7.0) [não amd64, i386]

• dep: libqt5gui5t64 (>= 5.2.0)

  Qt 5 GUI module

  ou libqt5gui5-gles (>= 5.2.0)

  Qt 5 GUI module — OpenGL ES variant

• dep: libqt5widgets5t64 (>= 5.0.2)

  Qt 5 widgets module

• dep: libqt5xml5t64 (>= 5.0.2)

  Qt 5 XML module

• dep: libstdc++6 (>= 13.1) [não arm64]

  Biblioteca C++ padrão da GNU v3

  dep: libstdc++6 (>= 14) [arm64]

• sug: boxshade

  embelezador de impressão de alinhamentos de seqüência múltipla

• sug: clustalw

  global multiple nucleotide or peptide sequence alignment

• sug: texlive-latex-extra

  TeX Live: LaTeX additional packages

Download de clustalx

Baixe para todas as arquiteturas disponíveis

Arquitetura	Versão	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	2.1+lgpl-9+b1	445.0 kB	1,427.0 kB	[lista de arquivos]
arm64	2.1+lgpl-9+b2	393.4 kB	1,398.0 kB	[lista de arquivos]
armel	2.1+lgpl-9+b1	378.0 kB	1,262.0 kB	[lista de arquivos]
armhf	2.1+lgpl-9+b1	390.7 kB	962.0 kB	[lista de arquivos]
i386	2.1+lgpl-9+b1	474.3 kB	1,470.0 kB	[lista de arquivos]
mips64el	2.1+lgpl-9+b1	395.1 kB	1,726.0 kB	[lista de arquivos]
ppc64el	2.1+lgpl-9+b1	428.8 kB	1,654.0 kB	[lista de arquivos]
riscv64	2.1+lgpl-9+b2	433.5 kB	1,130.0 kB	[lista de arquivos]
s390x	2.1+lgpl-9+b1	446.3 kB	1,470.0 kB	[lista de arquivos]