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[ Source: r-bioc-tfbstools  ]

Package: r-bioc-tfbstools (1.44.0+dfsg-2 and others)

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GNU R Transcription Factor Binding Site (TFBS) Analysis

TFBSTools is a package for the analysis and manipulation of transcription factor binding sites. It includes matrices conversion between Position Frequency Matirx (PFM), Position Weight Matirx (PWM) and Information Content Matrix (ICM). It can also scan putative TFBS from sequence/alignment, query JASPAR database and provides a wrapper of de novo motif discovery software.

Other Packages Related to r-bioc-tfbstools

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Download r-bioc-tfbstools

Download for all available architectures
Architecture Version Package Size Installed Size Files
alpha (unofficial port) 1.44.0+dfsg-2 1,000.3 kB1,913.0 kB [list of files]
amd64 1.44.0+dfsg-2 1,000.3 kB1,865.0 kB [list of files]
arm64 1.44.0+dfsg-2 1,000.2 kB1,913.0 kB [list of files]
hppa (unofficial port) 1.40.0+dfsg-1 979.8 kB1,836.0 kB [list of files]
ia64 (unofficial port) 1.40.0+dfsg-1 980.6 kB1,841.0 kB [list of files]
mips64el 1.44.0+dfsg-2 1,000.2 kB1,913.0 kB [list of files]
ppc64 (unofficial port) 1.44.0+dfsg-2 1,000.9 kB1,913.0 kB [list of files]
ppc64el 1.44.0+dfsg-2 1,000.7 kB1,913.0 kB [list of files]
riscv64 1.44.0+dfsg-2 1,000.1 kB1,857.0 kB [list of files]
s390x 1.44.0+dfsg-2 1,000.7 kB1,861.0 kB [list of files]
sh4 (unofficial port) 1.20.0+dfsg-1 874.6 kB1,736.0 kB [list of files]
sparc64 (unofficial port) 1.20.0+dfsg-1 874.2 kB1,737.0 kB [list of files]
x32 (unofficial port) 1.36.0+dfsg-2 987.8 kB1,852.0 kB [list of files]