Pacote: phybin (0.3-6)

[ Fonte: phybin  ]

binning/clustering newick trees by topology

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

Outros pacotes relacionados a phybin

• dep: libc6 (>= 2.34)

  GNU Biblioteca C: Bibliotecas compartilhadas
  também um pacote virtual fornecido por libc6-udeb

• dep: libffi8 (>= 3.4)

  Biblioteca runtime Interface de Função Estrangeira

• dep: libgmp10 (>= 2:6.2.1+dfsg1)

  biblioteca aritmética de multi precisão

Download de phybin

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