Package: fastqtl (2.184+v7+dfsg-4 and others) [debports]

[ Source:  ]

Quantitative Trait Loci (QTL) mapper in cis for molecular phenotypes

The goal of FastQTL is to identify single-nucleotide polymorphisms (SNPs) which are significantly associated with various molecular phenotypes (i.e. expression of known genes, cytosine methylation levels, etc). It performs scans for all possible phenotype-variant pairs in cis (i.e. variants located within a specific window around a phenotype). FastQTL implements a new permutation scheme (Beta approximation) to accurately and rapidly correct for multiple-testing at both the genotype and phenotype levels.

Other Packages Related to fastqtl

• dep: libblas3

  Implementações de Referências Básicas de Álgebra Linear , Biblioteca compartilhada

  or libblas.so.3

  virtual package provided by libatlas3-base, libblas3, libblis4-openmp, libblis4-pthread, libblis4-serial, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libboost-iostreams1.83.0 (>= 1.83.0)

  biblioteca Boost.Iostreams

• dep: libboost-program-options1.83.0 (>= 1.83.0)

  program options library for C++

• dep: libc6.1 (>= 2.34)

  GNU Biblioteca C: Bibliotecas compartilhadas
  also a virtual package provided by libc6.1-udeb

• dep: libgcc-s1 (>= 3.4)

  Biblioteca de suporte GCC

• dep: libgsl28 (>= 2.8+dfsg)

  GNU Scientific Library (GSL) -- library package

• dep: libhts3t64 (>= 1.17)

  C library for high-throughput sequencing data formats

• dep: libstdc++6 (>= 13.1)

  Biblioteca C++ padrão da GNU v3

• dep: python3

  linguagem orientada a objetos de alto nível e interativa (versão python3 padrão)

• dep: r-mathlib (>= 4.4.1)

  GNU R standalone mathematics library

• rec: r-cran-argparser

  GNU R command-line argument parser

• rec: r-cran-qvalue

  Package not available

• rec: r-cran-tools

  Package not available

• sug: fastqtl-doc

  QTL mapper in cis for molecular phenotypes - documentation

Download fastqtl

Download for all available architectures

Architecture	Version	Package Size	Installed Size	Files
alpha (unofficial port)	2.184+v7+dfsg-4+b4	194.1 kB	793.0 kB	[list of files]