Package: kalign (1:3.3-1 and others)

Links for kalign

Debian Resources:

Download Source Package kalign:

Maintainers:

Debian Med Packaging Team (QA Page, Mail Archive)
Charles Plessy (QA Page)
Andreas Tille (QA Page)

External Resources:

Homepage [msa.sbc.su.se]

Similar packages:

Global and progressive multiple sequence alignment

Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::plaintext, Works with: Need an extra tag

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also a virtual package provided by libc6-udeb
dep: libgomp1 (>= 6)

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enh: bioperl-run

BioPerl wrappers: scripts
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Multiple Sequence Alignment

Download kalign

Download for all available architectures
Architecture	Version	Package Size	Installed Size	Files
amd64	1:3.3-1+b3	133.4 kB	1,144.0 kB	[list of files]