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[ Fonte: sumaclust  ]

Pacote: sumaclust (1.0.36+ds-2)

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fast and exact clustering of genomic sequences

With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumaclust is a program developed by the LECA. Sumaclust aims to cluster sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumaclust clusters sequences using the same clustering algorithm as UCLUST and CD- HIT. This algorithm is mainly useful to detect the 'erroneous' sequences created during amplification and sequencing protocols, deriving from 'true' sequences.

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Download de sumaclust

Baixe para todas as arquiteturas disponíveis
Arquitetura Tamanho do pacote Tamanho instalado Arquivos
amd64 100.6 kB164.0 kB [lista de arquivos]
arm64 99.6 kB195.0 kB [lista de arquivos]
armel 101.6 kB195.0 kB [lista de arquivos]
armhf 99.5 kB195.0 kB [lista de arquivos]
i386 100.9 kB163.0 kB [lista de arquivos]
mips64el 100.1 kB197.0 kB [lista de arquivos]
mipsel 100.1 kB196.0 kB [lista de arquivos]
ppc64el 101.4 kB260.0 kB [lista de arquivos]
s390x 99.5 kB159.0 kB [lista de arquivos]