Pacote: spaln (2.4.13f+dfsg-1)

[ Fonte: spaln  ]

splicing-aware transcript-alignment to genomic DNA

Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query.

spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer.

Outros pacotes relacionados a spaln

• dep: libc6 (>= 2.34)

  GNU Biblioteca C: Bibliotecas compartilhadas
  também um pacote virtual fornecido por libc6-udeb

• dep: libgcc-s1 (>= 3.3.1)

  Biblioteca de suporte GCC

• dep: libstdc++6 (>= 5)

  Biblioteca C++ padrão da GNU v3

• dep: spaln-data

  splicing-aware transcript-alignment to genomic DNA (data)

• dep: zlib1g (>= 1:1.2.0.2)

  biblioteca de compressão - runtime (tempo de execução)

Download de spaln

Baixe para todas as arquiteturas disponíveis

Arquitetura	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	338.7 kB	821.0 kB	[lista de arquivos]
arm64	304.6 kB	835.0 kB	[lista de arquivos]
mips64el	323.1 kB	1,047.0 kB	[lista de arquivos]
ppc64el	353.4 kB	1,092.0 kB	[lista de arquivos]
s390x	341.4 kB	954.0 kB	[lista de arquivos]