Pacote: minimap (0.2-7)

[ Fonte: minimap  ]

tool for approximate mapping of long biosequences such as DNA reads

Minimap is an experimental tool to efficiently find multiple approximate mapping positions between two sets of long biological sequences, such as between DNA reads and reference genomes, between genomes and between long noisy reads. Minimap does not generate alignments as of now and because of this, it is usually tens of times faster than mainstream aligners. It does not replace mainstream aligners, but it can be useful when you want to quickly identify long approximate matches at moderate divergence among a huge collection of sequences. For this task, it is much faster than most existing tools.

Etiquetas: Campo: Biologia, Bioinformática, Implementado em: implemented-in::c, interface::commandline, Função: Programa, Alcance: scope::utility, use::calculating, Funciona com: Sequência biológica

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Download de minimap

Baixe para todas as arquiteturas disponíveis

Arquitetura	Tamanho do pacote	Tamanho instalado	Arquivos
amd64	25.3 kB	63.0 kB	[lista de arquivos]
arm64	23.6 kB	83.0 kB	[lista de arquivos]
armel	25.3 kB	82.0 kB	[lista de arquivos]
armhf	22.8 kB	82.0 kB	[lista de arquivos]
i386	27.9 kB	66.0 kB	[lista de arquivos]
mips64el	25.2 kB	85.0 kB	[lista de arquivos]
mipsel	26.1 kB	84.0 kB	[lista de arquivos]
ppc64el	27.7 kB	83.0 kB	[lista de arquivos]
s390x	24.5 kB	63.0 kB	[lista de arquivos]