Pakiet źródłowy: bcbio (1.2.5-1)
[contrib]
Odnośniki dla bcbio
Zasoby systemu Debian:
Opiekunowie:
Zasoby zewnętrzne:
Z tego pakietu źródłowego zbudowano następujące pakiety binarne:
- bcbio
- toolkit for analysing high-throughput sequencing data
- python3-bcbio
- library for analysing high-throughput sequencing data
Inne pakiety związane z bcbio
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python3-pysam
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python3-vcf
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atropos
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bcftools
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- adep:
bedtools
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- adep:
biobambam2
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- adep:
bowtie2
- ultrafast memory-efficient short read aligner
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- adep:
cnvkit
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- adep:
fastqc
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- adep:
freebayes
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- adep:
gffread
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grabix
- wee tool for random access into BGZF files
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- adep:
gsort
- sort genomic data
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- adep:
hisat2
- graph-based alignment of short nucleotide reads to many genomes
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- adep:
hts-nim-tools
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libfreetype6
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lumpy-sv
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multiqc
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perl
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- adep:
libpicard-java
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libvcflib-tools
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- adep:
picard-tools
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- adep:
python3-biopython
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- adep:
python3-cyvcf2
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python3-geneimpacts
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- adep:
python3-pytest-mock
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- adep:
python3-seqcluster
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- adep:
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- adep:
rapmap
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-
- adep:
rna-star
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-
- adep:
r-other-wasabi
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- adep:
r-bioc-htsfilter
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- adep:
r-bioc-degreport
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- adep:
r-bioc-purecn
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- adep:
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- adep:
r-bioc-titancna
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- adep:
r-bioc-tximport
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-
- adep:
salmon
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- adep:
samblaster
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- adep:
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- adep:
seqan-apps
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-
- adep:
seqtk
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- adep:
subread
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- adep:
tabix
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-
- adep:
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- adep:
umis
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-
- adep:
vcfanno
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- adep:
vt
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- adep:
wham-align
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xonsh
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python3-sphinx
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