Pakiet: python3-biopython (1.78+dfsg-4)

[ Pakiet źródłowy: python-biopython  ]

Python3 library for bioinformatics

The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology.

It is a distributed collaborative effort to develop Python3 libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project.

Inne pakiety związane z python3-biopython

• dep: libc6 (>= 2.4)

  Biblioteka GNU C: biblioteki współdzielone
  również pakiet wirtualny udostępniany przez libc6-udeb

• dep: python3

  interactive high-level object-oriented language (default python3 version)

  dep: python3 (<< 3.10)

  dep: python3 (>= 3.9~)

• dep: python3-numpy (>= 1:1.16.0~rc1)

  Fast array facility to the Python 3 language

• dep: python3-numpy-abi9

  pakiet wirtualny udostępniany przez python3-numpy

• dep: python3-reportlab

  ReportLab library to create PDF documents using Python3

• rec: ncbi-blast+ (>= 2.10.1-3)

  next generation suite of BLAST sequence search tools

• rec: python-biopython-doc (= 1.78+dfsg-4)

  Documentation for the Biopython library

• sug: bwa

  Burrows-Wheeler Aligner

• sug: clustalo

  General-purpose multiple sequence alignment program for proteins

• sug: clustalw

  global multiple nucleotide or peptide sequence alignment

• sug: dialign

  Dopasowanie wielu sekwencji w oparciu o segmenty

• sug: dssp (>= 4.0.0)

  protein secondary structure assignment based on 3D structure

• sug: emboss

  European molecular biology open software suite

• sug: fasttree

  phylogenetic trees from alignments of nucleotide or protein sequences

• sug: mafft

  Multiple alignment program for amino acid or nucleotide sequences

• sug: muscle

  Multiple alignment program of protein sequences

• sug: phylip

  package of programs for inferring phylogenies

• sug: phyml

  Phylogenetic estimation using Maximum Likelihood

• sug: prank

  Probabilistic Alignment Kit for DNA, codon and amino-acid sequences

• sug: probcons

  PROBabilistic CONSistency-based multiple sequence alignment

• sug: python3-matplotlib

  Python based plotting system in a style similar to Matlab (Python 3)

• sug: python3-mmtf

  binary encoding of biological structures (Python 3)

• sug: python3-mysqldb

  Python interface to MySQL

• sug: python3-pil

  Biblioteka obrazowania w Pythonie (Python 3)

• sug: python3-psycopg2

  Python 3 module for PostgreSQL

• sug: python3-rdflib

  Python 3 library containing an RDF triple store and RDF parsers/serializers

• sug: python3-renderpm

  python low level render interface

• sug: python3-scipy

  Narzędzia naukowe dla Pythona 3

• sug: python3-tk

  Tkinter - Writing Tk applications with Python 3.x

• sug: raxml

  Randomizowane maksymalne prawdopodobieństwo drzew filogenetycznych

• sug: samtools

  Przetwarzanie dopasowań sekwencji w formatach SAM, BAM i CRAM

• sug: t-coffee

  Wielosekwencyjne wyrównanie

• sug: w3-dtd-mathml

  Mathematical Markup Language V2.0 DTD

• sug: wise

  comparison of biopolymers, like DNA and protein sequences

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