Pakiet: r-bioc-scran (1.26.2+dfsg-1)

[ Pakiet źródłowy: r-bioc-scran  ]

BioConductor methods for single-cell RNA-Seq data analysis

Implements functions for low-level analyses of single-cell RNA-seq data. Methods are provided for normalization of cell-specific biases, assignment of cell cycle phase, detection of highly variable and significantly correlated genes, identification of marker genes, and other common tasks in routine single-cell analysis workflows.

Inne pakiety związane z r-bioc-scran

• dep: libc6 (>= 2.29)

  Biblioteka GNU C: biblioteki współdzielone
  również pakiet wirtualny udostępniany przez libc6-udeb

• dep: libgcc-s1 (>= 3.0) [nie armel, armhf]

  Biblioteka wspomagająca GCC

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: liblapack3

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  lub liblapack.so.3

  pakiet wirtualny udostępniany przez libatlas3-base, liblapack3, libopenblas0-openmp, libopenblas0-pthread, libopenblas0-serial

• dep: libstdc++6 (>= 11)

  Standardowa biblioteka GNU C++, wersja 3

• dep: r-api-4.0

  pakiet wirtualny udostępniany przez r-base-core

• dep: r-api-bioc-3.16

  pakiet wirtualny udostępniany przez r-bioc-biocgenerics

• dep: r-base-core (>= 4.2.2.20221110-2)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-beachmat

  I/O for several formats storing matrix data

• dep: r-bioc-biocgenerics

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• dep: r-bioc-biocparallel

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• dep: r-bioc-biocsingular

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• dep: r-bioc-bluster

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• dep: r-bioc-delayedarray

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• dep: r-bioc-delayedmatrixstats

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• dep: r-bioc-edger

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• dep: r-bioc-limma

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• dep: r-bioc-metapod

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• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-scuttle

  BioConductor single-cell RNA-Seq analysis utilities

• dep: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• dep: r-bioc-summarizedexperiment

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• dep: r-cran-bh

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• dep: r-cran-dqrng

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• dep: r-cran-igraph

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• dep: r-cran-matrix

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• dep: r-cran-rcpp

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• dep: r-cran-statmod

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• sug: r-bioc-biobase

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• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-deseq2

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• sug: r-bioc-hdf5array

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• sug: r-bioc-residualmatrix

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• sug: r-bioc-scaledmatrix

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• sug: r-bioc-scater

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• sug: r-bioc-scrnaseq

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Architektura	Rozmiar pakietu	Rozmiar po instalacji	Pliki
amd64	966,7 KiB	1 371,0 KiB	[lista plików]
arm64	950,2 KiB	1 347,0 KiB	[lista plików]
armel	949,7 KiB	1 317,0 KiB	[lista plików]
armhf	950,2 KiB	1 249,0 KiB	[lista plików]
i386	967,8 KiB	1 381,0 KiB	[lista plików]
mips64el	948,7 KiB	1 515,0 KiB	[lista plików]
mipsel	948,3 KiB	1 421,0 KiB	[lista plików]
ppc64el	963,4 KiB	1 475,0 KiB	[lista plików]
s390x	958,2 KiB	1 387,0 KiB	[lista plików]