Pakket: tree-puzzle (5.3~rc16+dfsg-9 en anderen)

[ Bron: tree-puzzle  ]

Reconstruction of phylogenetic trees by maximum likelihood

TREE-PUZZLE (the new name for PUZZLE) is an interactive console program that implements a fast tree search algorithm, quartet puzzling, that allows analysis of large data sets and automatically assigns estimations of support to each internal branch. TREE-PUZZLE also computes pairwise maximum likelihood distances as well as branch lengths for user specified trees. Branch lengths can also be calculated under the clock-assumption. In addition, TREE-PUZZLE offers a novel method, likelihood mapping, to investigate the support of a hypothesized internal branch without computing an overall tree and to visualize the phylogenetic content of a sequence alignment.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::analysing, use::comparing, Supports Format: Plain Text, Works with: Need an extra tag

Andere aan tree-puzzle gerelateerde pakketten

• dep: libc6 (>= 2.34)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libsprng2

  SPRNG Scalable Parallel RNG library -- library package

• rec: tree-puzzle-doc

  Reconstruction of phylogenetic trees by maximum likelihood (doc)

• sug: phylip

  package of programs for inferring phylogenies

• sug: treetool

  Pakket niet beschikbaar

tree-puzzle downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	5.3~rc16+dfsg-9+b1	165,3 kB	397,0 kB	[overzicht]
arm64	5.3~rc16+dfsg-9+b1	150,5 kB	428,0 kB	[overzicht]
armel	5.3~rc16+dfsg-9+b1	160,0 kB	412,0 kB	[overzicht]
armhf	5.3~rc16+dfsg-9+b1	150,9 kB	304,0 kB	[overzicht]
i386	5.3~rc16+dfsg-9+b1	177,7 kB	484,0 kB	[overzicht]
mips64el	5.3~rc16+dfsg-9+b1	164,8 kB	508,0 kB	[overzicht]
ppc64el	5.3~rc16+dfsg-9+b1	175,0 kB	493,0 kB	[overzicht]
s390x	5.3~rc16+dfsg-9+b1	175,4 kB	440,0 kB	[overzicht]