Pakket: r-bioc-dnacopy (1.78.0-1)

[ Bron: r-bioc-dnacopy  ]

R package: DNA copy number data analysis

Implements the circular binary segmentation (CBS) algorithm to segment DNA copy number data and identify genomic regions with abnormal copy number.

This package is for analyzing array DNA copy number data, which is usually (but not always) called array Comparative Genomic Hybridization (array CGH) data It implements a methodology for finding change-points in these data which are points after which the (log) test over reference ratios have changed location. This model is that the change-points correspond to positions where the underlying DNA copy number has changed. Therefore, change-points can be used to identify regions of gained and lost copy number. Also provided is a function for making relevant plots of these data.

Andere aan r-bioc-dnacopy gerelateerde pakketten

• dep: libc6 (>= 2.27) [riscv64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.29) [niet riscv64]

• dep: libgfortran5 (>= 10)

  Runtime library for GNU Fortran applications

• dep: r-api-4.0

  virtueel pakket geboden door r-base-core

• dep: r-api-bioc-3.19

  virtueel pakket geboden door r-bioc-biocgenerics

r-bioc-dnacopy downloaden

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Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	368,9 kB	514,0 kB	[overzicht]
arm64	367,0 kB	526,0 kB	[overzicht]
mips64el	368,2 kB	527,0 kB	[overzicht]
ppc64el	370,9 kB	526,0 kB	[overzicht]
riscv64	369,1 kB	498,0 kB	[overzicht]
s390x	371,4 kB	510,0 kB	[overzicht]