Pakket: phyx (1.3.1+ds-2 en anderen)

[ Bron: phyx  ]

UNIX-style phylogenetic analyses on trees and sequences

phyx provides a convenient, lightweight and inclusive toolkit consisting of programs spanning the wide breadth of programs utilized by researchers performing phylogenomic analyses. Modeled after Unix/GNU/Linux command line tools, individual programs perform a single task and operate on standard I/O streams. A result of this stream-centric approach is that, for most programs, only a single sequence or tree is in memory at any moment. Thus, large datasets can be processed with minimal memory requirements. phyx’s ever-growing complement of programs consists of over 35 programs focused on exploring, manipulating, analyzing and simulating phylogenetic objects (alignments, trees and MCMC logs). As with standard Unix command line tools, these programs can be piped (together with non-phyx tools), allowing the easy construction of efficient analytical pipelines.

Andere aan phyx gerelateerde pakketten

• dep: libarmadillo14 (>= 1:14.0.1+dfsg)

  streamlined C++ linear algebra library

• dep: libc6 (>= 2.37) [sh4]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.38) [niet alpha, sh4]

• dep: libc6.1 (>= 2.34) [alpha]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

• dep: libgcc-s1 (>= 4.0) [niet arm64, hppa, i386, m68k, mips64el, riscv64, sh4]

  GCC support bibliotheek

  dep: libgcc-s1 (>= 4.2) [i386, sh4]

  dep: libgcc-s1 (>= 4.5) [arm64, mips64el, riscv64]

• dep: libgcc-s2 (>= 4.2.1) [m68k]

  GCC support bibliotheek

• dep: libgcc-s4 (>= 4.1.1) [hppa]

  GCC support bibliotheek

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libnlopt0 (>= 2.6.1)

  nonlinear optimization library

• dep: libstdc++6 (>= 13.1) [niet alpha]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 14-20240330-1) [alpha]

• dep: python3

  interactive high-level object-oriented language (default python3 version)

phyx downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Versie	Pakketgrootte	Geïnstalleerde grootte	Bestanden
alpha (unofficial port)	1.3.1+ds-2+b2	2.140,7 kB	23.856,0 kB	[overzicht]
amd64	1.3.1+ds-2+b2	2.225,2 kB	20.559,0 kB	[overzicht]
arm64	1.3.1+ds-2+b2	2.070,8 kB	21.003,0 kB	[overzicht]
armel	1.3.1+ds-2+b2	1.833,1 kB	18.386,0 kB	[overzicht]
armhf	1.3.1+ds-2+b2	1.789,6 kB	13.166,0 kB	[overzicht]
hppa (unofficial port)	1.3.1+ds-2+b2	1.950,7 kB	18.593,0 kB	[overzicht]
i386	1.3.1+ds-2+b2	2.363,0 kB	21.490,0 kB	[overzicht]
m68k (unofficial port)	1.3.1+ds-2+b2	2.128,1 kB	19.362,0 kB	[overzicht]
mips64el	1.3.1+ds-2+b2	2.185,7 kB	26.333,0 kB	[overzicht]
ppc64 (unofficial port)	1.3.1+ds-2+b2	2.154,9 kB	26.827,0 kB	[overzicht]
ppc64el	1.3.1+ds-2+b2	2.149,8 kB	25.099,0 kB	[overzicht]
riscv64	1.3.1+ds-2+b2	2.076,6 kB	15.671,0 kB	[overzicht]
s390x	1.3.1+ds-2+b2	2.097,8 kB	21.463,0 kB	[overzicht]
sh4 (unofficial port)	1.3.1+ds-2+b2	2.206,8 kB	20.189,0 kB	[overzicht]
sparc64 (unofficial port)	1.3.1+ds-2+b1	2.100,5 kB	52.824,0 kB	[overzicht]
x32 (unofficial port)	1.3.1+ds-2+b2	2.187,3 kB	19.438,0 kB	[overzicht]