Pakket: clustalw (2.1+lgpl-7)

[ Bron: clustalw  ]

global multiple nucleotide or peptide sequence alignment

This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.

The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.

Tags: Biology: Clustal/ALN, Proteins, Field: field::biology, field::biology:bioinformatics, Implemented in: implemented-in::c++, interface::commandline, User Interface: Text-based Interactive, Role: role::program, scope::utility, Purpose: Comparing, Supports Format: works-with-format::plaintext, works-with::TODO

Andere aan clustalw gerelateerde pakketten

• dep: libc6 (>= 2.29)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC support bibliotheek

• dep: libstdc++6 (>= 5.2)

  GNU Standard C++ Library v3

• sug: clustalx

  Multiple-alignment van nucleotide- en eiwit-sequenties (grafische interface)

• sug: seaview

  Multiplatform interface for sequence alignment and phylogeny

• enh: bioperl-run

  BioPerl wrappers: scripts

• enh: emboss

  European molecular biology open software suite

• enh: t-coffee

  Multiple Sequence Alignment

clustalw downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
mips64el	259,1 kB	941,0 kB	[overzicht]