Pakket: maq (0.7.1-9) [debports]

[ Bron:  ]

maps short fixed-length polymorphic DNA sequence reads to reference sequences

Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2.

Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.

Andere aan maq gerelateerde pakketten

• dep: libc6.1 (>= 2.31)

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6.1-udeb

• dep: libgcc-s1 (>= 4.2)

  GCC support bibliotheek

• dep: libstdc++6 (>= 5)

  GNU Standard C++ Library v3

• dep: zlib1g (>= 1:1.2.3.3)

  compressiebibliotheek - programma's

• sug: bwa

  Burrows-Wheeler Aligner

• sug: samtools

  processing sequence alignments in SAM, BAM and CRAM formats

maq downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
ia64 (unofficial port)	329,5 kB	752,0 kB	[overzicht]