Pakket: gromacs-openmpi (2019.1-1)

[ Bron: gromacs  ]

Molecular dynamics sim, binaries for OpenMPI parallelization

GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles.

It is primarily designed for biochemical molecules like proteins and lipids that have a lot of complicated bonded interactions, but since GROMACS is extremely fast at calculating the nonbonded interactions (that usually dominate simulations) many groups are also using it for research on non- biological systems, e.g. polymers.

This package contains only the core simulation engine with parallel support using the OpenMPI interface. It is suitable for nodes of a processing cluster, or for multiprocessor machines.

Tags: Softwareontwikkeling: Ontwikkelen in C, Bibliotheken, Field: Biology, field::chemistry, implemented-in::c, User Interface: Command Line, Role: role::devel-lib, role::program, Scope: Utility, Works with: Packaged Software

Andere aan gromacs-openmpi gerelateerde pakketten

• dep: libc6 (>= 2.27) [amd64, arm64]

  GNU C Bibliotheek: Gedeelde bibliotheken
  Ook een virtueel pakket geboden door: libc6-udeb

  dep: libc6 (>= 2.28) [armhf, i386]

• dep: libfftw3-double3 (>= 3.3.5)

  Library for computing Fast Fourier Transforms - Double precision

• dep: libfftw3-single3 (>= 3.3.5)

  Library for computing Fast Fourier Transforms - Single precision

• dep: libgcc1 (>= 1:3.0) [amd64, arm64]

  GCC support bibliotheek

  dep: libgcc1 (>= 1:3.5) [armhf]

  dep: libgcc1 (>= 1:7) [i386]

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libhwloc5 (>= 1.11.12)

  Hierarchical view of the machine - shared libs

• dep: libopenmpi3

  high performance message passing library -- shared library

• dep: libstdc++6 (>= 5.2) [amd64, i386]

  GNU Standard C++ Library v3

  dep: libstdc++6 (>= 6) [arm64, armhf]

• dep: openmpi-bin (>= 1.2.3)

  high performance message passing library -- binaries

• dep: zlib1g (>= 1:1.2.0)

  compressiebibliotheek - programma's

• rec: gromacs

  Molecular dynamics simulator, with building and analysis tools

• sug: gromacs-data

  GROMACS molecular dynamics sim, data and documentation

gromacs-openmpi downloaden

Pakket downloaden voor alle beschikbare platforms

Platform	Pakketgrootte	Geïnstalleerde grootte	Bestanden
amd64	8.052,7 kB	23.271,0 kB	[overzicht]
arm64	5.660,2 kB	14.917,0 kB	[overzicht]
armhf	3.507,6 kB	8.937,0 kB	[overzicht]
i386	6.789,0 kB	22.189,0 kB	[overzicht]