Package: bitseq (0.7.5+dfsg-6)

[ Source: bitseq  ]

Bayesian Inference of Transcripts from Sequencing Data

BitSeq is an application for inferring expression levels of individual transcripts from sequencing (RNA-Seq) data and estimating differential expression (DE) between conditions. An advantage of this approach is the ability to account for both technical uncertainty and intrinsic biological variance in order to avoid false DE calls. The technical contribution to the uncertainty comes both from finite read-depth and the possibly ambiguous mapping of reads to multiple transcripts.

Other Packages Related to bitseq

• dep: libc6 (>= 2.29)

  GNU C 라이브러리: 공유 라이브러리
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0)

  GCC 기능 지원 라이브러리

• dep: libgomp1 (>= 6)

  GCC OpenMP (GOMP) 지원 라이브러리

• dep: libstdc++6 (>= 5.2)

  GNU 표준 C++ 라이브러리 v3

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-numpy

  Fast array facility to the Python language (Python 3)

• dep: zlib1g (>= 1:1.2.3.3)

  압축 라이브러리 - 런타임

• sug: samtools

  SAM, BAM, CRAM 형식에서 시퀀스 정렬 처리

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