Package: pbalign (0.3.2-1)

[ Source: pbalign  ]

map Pacific Biosciences reads to reference DNA sequences

pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format.

This package is part of the SMRTAnalysis suite.

Other Packages Related to pbalign

• dep: blasr (>= 5.3+0)

  mapping single-molecule sequencing reads

• dep: python

  대화형 고급 객체 지향 언어 (파이선2 버젼)

• dep: python-pbalign (= 0.3.2-1)

  map Pacific Biosciences reads to reference DNA sequences (Python2)

• dep: python-pkg-resources

  pkg_resources를 사용한 패키지 발견 및 리소스 액세스

• rec: hdf5-tools

  계층화 데이타 형식 5 (HDF5) - 런타임 도구

• rec: python-pbh5tools

  tools for manipulating Pacific Biosciences HDF5 files -- Python 2 library

• sug: bowtie2

  ultrafast memory-efficient short read aligner

• sug: gmap

  spliced and SNP-tolerant alignment for mRNA and short reads

• sug: pbalign-doc

  documentation for pbalign

Download pbalign

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Architecture	Package Size	Installed Size	Files
all	9.3 kB	44.0 kB	[list of files]