Package: readucks (0.0.3-2)

[ Source: readucks  ]

Nanopore read de-multiplexer (read demux -> readux -> readucks, innit)

This package is inspired by the demultiplexing options in porechop but without the adapter trimming options - it just demuxes. It uses the parasail library with its Python bindings to do pairwise alignment which provides a considerable speed up over the seqan library used by porechop due to its low-level use of vector processor instructions.

Other Packages Related to readucks

• dep: python3

  interactive high-level object-oriented language (default python3 version)

• dep: python3-biopython

  Python3 library for bioinformatics

• dep: python3-parasail

  Python3 bindings for the parasail C library

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Architecture	Package Size	Installed Size	Files
all	19.8 kB	107.0 kB	[list of files]