[ ソース: libvcflib ]
パッケージ: libvcflib-tools (1.0.0~rc2+dfsg-2)
libvcflib-tools に関するリンク
Debian の資源:
libvcflib ソースパッケージをダウンロード:
- [libvcflib_1.0.0~rc2+dfsg-2.dsc]
- [libvcflib_1.0.0~rc2+dfsg.orig.tar.xz]
- [libvcflib_1.0.0~rc2+dfsg-2.debian.tar.xz]
メンテナ:
外部の資源:
- ホームページ [github.com]
類似のパッケージ:
C++ library for parsing and manipulating VCF files (tools)
The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.
vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:
* an API for parsing and operating on records of genomic variation as it can be described by the VCF format, * and a collection of command-line utilities for executing complex manipulations on VCF files.
This package contains several tools using the library.
その他の libvcflib-tools 関連パッケージ
|
|
|
|
-
- dep: libbz2-1.0
- 高品質なブロックソートファイル圧縮器 - ランタイム
-
- dep: libc6 (>= 2.23)
- GNU C ライブラリ: 共有ライブラリ
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
-
- dep: libdisorder0 (>= 0.0.2)
- library for entropy measurement of byte streams
-
- dep: libfastahack0 (>= 0.0+git20160702.bbc645f)
- library for indexing and sequence extraction from FASTA files (lib)
-
- dep: libgcc1 (>= 1:3.0)
- GCC 共有ライブラリ
-
- dep: libhts2 (>= 1.0)
- C library for high-throughput sequencing data formats
-
- dep: liblzma5 (>= 5.1.1alpha+20110809)
- XZ 形式の圧縮ライブラリ
-
- dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)
- determine similar regions between two strings or genomic sequences (lib)
-
- dep: libstdc++6 (>= 5.2)
- GNU 標準 C++ ライブラリ v3
-
- dep: libtabixpp0
- C++ wrapper to tabix indexer
-
- dep: libvcflib1
- C++ library for parsing and manipulating VCF files
-
- dep: python
- 対話式の高レベルオブジェクト指向言語 (Python2 バージョン)
-
- dep: r-base-core
- GNU R core of statistical computation and graphics system
-
- dep: r-cran-ggplot2
- implementation of the Grammar of Graphics
-
- dep: r-cran-gridbase
- GNU R Integration of base and grid graphics
-
- dep: r-cran-plyr
- tools for splitting, applying and combining data
-
- dep: zlib1g (>= 1:1.1.4)
- 圧縮ライブラリ - ランタイム
-
- sug: r-cran-pracma
- practical numerical math functions for GNU R