[ ソース: pairtools ]
パッケージ: python3-pairtools-examples (0.3.0-2 など)
python3-pairtools-examples に関するリンク
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外部の資源:
- ホームページ [github.com]
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Process sequencing data from a Hi-C experiment (examples)
Simple and fast command-line framework to process sequencing data from a Hi-C experiment.
Process pair-end sequence alignments and perform the following operations:
- Detect ligation junctions (a.k.a. Hi-C pairs) in aligned paired-end
sequences of Hi-C DNA molecules
- Sort .pairs files for downstream analyses
- Detect, tag and remove PCR/optical duplicates
- Generate extensive statistics of Hi-C datasets
- Select Hi-C pairs given flexibly defined criteria
- Restore .sam alignments from Hi-C pairs
This package contains some examples
その他の python3-pairtools-examples 関連パッケージ
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- enh: python3-pairtools
- Framework to process sequencing data from a Hi-C experiment