[ Source: skewer ]
Package: skewer (0.2.2-6 and others)
Links for skewer
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Download Source Package skewer:
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External Resources:
- Homepage [github.com]
Similar packages:
post-processing of high-throughput DNA sequence reads
skewer implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming and it is specially designed for processing next-generation sequencing (NGS) paired-end sequences.
Features
* Detection and removal of adapter sequences * Insertion and deletion allowed in pattern matching * Targeted at Single End, Paired End (PE), and Long Mate Pair (LMP) reads * Demultiplexing of barcoded sequencing runs * Multi-threading support * Trimming based on phred quality scores * IUPAC characters for barcodes and adapters * Compressed input and output support
Other Packages Related to skewer
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- GNU C könyvtár: megosztott könyvtárak
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 4.2)
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- dep: libstdc++6 (>= 11)
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Download skewer
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
i386 | 0.2.2-6+b1 | 90.2 kB | 231.0 kB | [list of files] |