Package: murasaki-mpi (1.68.6-8 and others)
Links for murasaki-mpi
Debian Resources:
Download Source Package murasaki:
Maintainers:
External Resources:
- Homepage [murasaki.dna.bio.keio.ac.jp]
Similar packages:
homology detection tool across multiple large genomes (MPI-version)
Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with 40 nodes: 52 wall minutes)) * scalable (Arbitrarily parallelizable across multiple nodes using MPI. Even a single node with 16GB of ram can handle over 1Gbp of sequence.) * unlimited pattern length * repeat tolerant * intelligent noise reduction
This package provides the MPI-enabled binary for murasaki. While this will speed up operation on multi-processor machines it will slow down on a single processor.
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Download murasaki-mpi
Architecture | Version | Package Size | Installed Size | Files |
---|---|---|---|---|
i386 | 1.68.6-8+b1 | 625.1 kB | 3,900.0 kB | [list of files] |