Package: ampliconnoise (1.29-8)

[ Source: ampliconnoise  ]

removal of noise from 454 sequenced PCR amplicons

AmpliconNoise is a package of applications to clean up high-throughput sequence data. It consists of three main parts:

Pyronoise - does flowgram-based clustering to spot misreads SeqNoise - removes PCR point mutations Perseus - removes PCR chimeras without the need for a set of reference sequences

Previously there was a standalone "Pyronoise" by the same authors and this package includes an updated version. There is also a "Denoiser" in Qiime which is related but distinct.

Tags: Role: Program

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• dep: libc6 (>= 2.14)

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• dep: libgsl23 (>= 2.5)

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• dep: libgslcblas0 (>= 2.4)

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• dep: libopenmpi3

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• dep: mafft

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• rec: openmpi-bin

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