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[ Source: flexbar  ]

Package: flexbar (1:3.5.0-3)

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flexible barcode and adapter removal for sequencing platforms

Flexbar preprocesses high-throughput sequencing data efficiently. It demultiplexes barcoded runs and removes adapter sequences. Moreover, trimming and filtering features are provided. Flexbar increases mapping rates and improves genome and transcriptome assemblies. It supports next-generation sequencing data in fasta/q and csfasta/q format from Illumina, Roche 454, and the SOLiD platform.

Parameter names changed in Flexbar. Please review scripts. The recent months, default settings were optimised, several bugs were fixed and various improvements were made, e.g. revamped command-line interface, new trimming modes as well as lower time and memory requirements.

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Download flexbar

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 343.4 kB1,154.0 kB [list of files]
arm64 296.7 kB1,090.0 kB [list of files]
armel 285.4 kB1,025.0 kB [list of files]
armhf 298.0 kB809.0 kB [list of files]
i386 348.4 kB1,165.0 kB [list of files]
mips64el 283.8 kB1,289.0 kB [list of files]
mipsel 285.8 kB1,258.0 kB [list of files]
ppc64el 331.8 kB1,342.0 kB [list of files]
s390x 298.1 kB1,158.0 kB [list of files]