Package: dialign-tx (1.0.2-13)

[ Source: dialign-t  ]

Segment-based multiple sequence alignment

DIALIGN-TX is a command line tool to perform multiple alignment of protein or DNA sequences. It is a complete reimplementation of the segment-base approach including several new improvements and heuristics that significantly enhance the quality of the output alignments compared to DIALIGN 2.2 and DIALIGN-T. For pairwise alignment, DIALIGN-TX uses a fragment-chaining algorithm that favours chains of low-scoring local alignments over isolated high-scoring fragments. For multiple alignment, DIALIGN-TX uses an improved greedy procedure that is less sensitive to spurious local sequence similarities.

Tags: Field: Biology, Bioinformatics, Implemented in: implemented-in::c, interface::commandline, Role: Program, Scope: Utility, Purpose: use::comparing, works-with-format::TODO, Supports Format: Plain Text, Works with: Need an extra tag

Other Packages Related to dialign-tx

• dep: dialign-tx-data (= 1.0.2-13)

  Segment-based multiple sequence alignment (data files)

• dep: libc6 (>= 2.29)

  GNU C könyvtár: megosztott könyvtárak
  also a virtual package provided by libc6-udeb

• enh: t-coffee

  Multiple Sequence Alignment

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Architecture	Package Size	Installed Size	Files
amd64	80.2 kB	204.0 kB	[list of files]
arm64	84.5 kB	188.0 kB	[list of files]
armel	68.1 kB	184.0 kB	[list of files]
armhf	65.1 kB	136.0 kB	[list of files]
i386	76.9 kB	204.0 kB	[list of files]
mips64el	97.5 kB	244.0 kB	[list of files]
mipsel	89.0 kB	211.0 kB	[list of files]
ppc64el	95.4 kB	277.0 kB	[list of files]
s390x	72.4 kB	200.0 kB	[list of files]