[ Source: openms ]
Paketti: topp (2.6.0+cleaned1-4 ja muut)
Links for topp
Debian-palvelut:
Imuroi lähdekoodipaketti openms:
- [openms_2.6.0+cleaned1-4.dsc]
- [openms_2.6.0+cleaned1.orig.tar.gz]
- [openms_2.6.0+cleaned1-4.debian.tar.xz]
Ylläpitäjät:
External Resources:
- Kotisivu [www.openms.de]
Samankaltaisia paketteja:
set of programs implementing The OpenMS Proteomic Pipeline
TOPP (the OpenMS proteomic pipeline) is a pipeline for the analysis of HPLC/MS data. It consists of a set of numerous small applications that can be chained together to create analysis pipelines tailored for a specific problem. The applications make use of the libopenms library. Some examples of these applications are :
- TOPPView: A viewer for mass spectrometry data. - TOPPAS: An assistant for GUI-driven TOPP workflow design. - DTAExtractor: Extracts spectra of an MS run file to several files in DTA format. - FileConverter: Converts between different MS file formats. - FileFilter: Extracts or manipulates portions of data from peak, feature or consensus feature files. - SpectraMerger: Merges spectra from an LC/MS map, either by precursor or by RT blocks. - BaselineFilter: Removes the baseline from profile spectra using a top-hat filter. - InternalCalibration: Applies an internal calibration. - PTModel: Trains a model for the prediction of proteotypic peptides from a training set. - RTPredict: Predicts retention times for peptides using a model trained by RTModel. - ExecutePipeline: Executes workflows created by TOPPAS.
Muut pakettiin topp liittyvät paketit
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- dep: libc6 (>= 2.38)
- GNU-C-kirjasto: jaetut kirjastot
myös näennäispaketti, jonka toteuttaa libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC:n apukirjasto
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- dep: libgomp1 (>= 6)
- GCC OpenMP (GOMP) support library
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- dep: libopenms2.6.0 (= 2.6.0+cleaned1-4+b3)
- library for LC/MS data management and analysis - runtime
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- dep: libqt5core5t64 (>= 5.15.1)
- Qt 5 core module
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- dep: libqt5gui5t64 (>= 5.11.3)
- Qt 5 GUI module
- tai libqt5gui5-gles (>= 5.11.3)
- Qt 5 GUI module — OpenGL ES variant
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- dep: libqt5widgets5t64 (>= 5.11.3)
- Qt 5 widgets module
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- dep: libstdc++6 (>= 14)
- GNU standardi C++ -kirjasto, versio 3
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- dep: libxerces-c3.2t64
- validating XML parser library for C++
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- dep: openms-common (= 2.6.0+cleaned1-4)
- package for LC/MS data management and analysis - shared data
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- sug: openms-doc
- package for LC/MS data management and analysis - documentation
Imuroi topp
Arkkitehtuuri | Versio | Paketin koko | Koko asennettuna | Tiedostot |
---|---|---|---|---|
i386 | 2.6.0+cleaned1-4+b3 | 3,299.8 kt | 16,751.0 kt | [tiedostoluettelo] |