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[ Source: bedtools  ]

Paketti: bedtools (2.31.1+dfsg-2)

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suite of utilities for comparing genomic features

The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by streaming several BEDTools together.

The groupBy utility is distributed in the filo package.

Tagit: Field: Biology, Bioinformatics, Implemented in: implemented-in::c++, interface::commandline, Role: Program, Scope: Suite, Purpose: use::analysing, use::comparing, Data Conversion, use::filtering, works-with::biological-sequence

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Arkkitehtuuri Paketin koko Koko asennettuna Tiedostot
amd64 661.8 kt2,106.0 kt [tiedostoluettelo]
arm64 574.4 kt2,006.0 kt [tiedostoluettelo]
armel 547.2 kt1,817.0 kt [tiedostoluettelo]
armhf 564.5 kt1,313.0 kt [tiedostoluettelo]
i386 727.9 kt2,301.0 kt [tiedostoluettelo]
mips64el 582.9 kt2,599.0 kt [tiedostoluettelo]
ppc64el 664.1 kt2,518.0 kt [tiedostoluettelo]
s390x 646.6 kt2,162.0 kt [tiedostoluettelo]