Paketti: r-bioc-bitseq (1.26.1+dfsg-1)

[ Source: r-bioc-bitseq  ]

transcript expression inference and analysis for RNA-seq data

The BitSeq package is targeted for transcript expression analysis and differential expression analysis of RNA-seq data in two stage process. In the first stage it uses Bayesian inference methodology to infer expression of individual transcripts from individual RNA-seq experiments. The second stage of BitSeq embraces the differential expression analysis of transcript expression. Providing expression estimates from replicates of multiple conditions, Log-Normal model of the estimates is used for inferring the condition mean transcript expression and ranking the transcripts based on the likelihood of differential expression.

Muut pakettiin r-bioc-bitseq liittyvät paketit

• dep: libc6 (>= 2.23)

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgcc1 (>= 1:3.0) [amd64, i386]

  GCC:n apukirjasto

  dep: libgcc1 (>= 1:3.5) [armhf]

  dep: libgcc1 (>= 1:4.2) [arm64]

• dep: libgomp1 (>= 4.9)

  GCC OpenMP (GOMP) support library

• dep: libstdc++6 (>= 5.2)

  GNU standardi C++ -kirjasto, versio 3

• dep: r-api-3.5

  näennäispaketti, jonka toteuttaa r-base-core

• dep: r-api-bioc-3.8

  näennäispaketti, jonka toteuttaa r-bioc-biocgenerics

• dep: r-base-core (>= 3.5.2-1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-iranges

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-rsamtools

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-zlibbioc

  (Virtual) zlibbioc Bioconductor package

• dep: zlib1g (>= 1:1.2.3.3)

  pakkauskirjaston ajonaikaistiedostot

Imuroi r-bioc-bitseq

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	961.6 kt	5,620.0 kt	[tiedostoluettelo]
arm64	933.3 kt	5,552.0 kt	[tiedostoluettelo]
armhf	927.6 kt	5,369.0 kt	[tiedostoluettelo]
i386	982.0 kt	5,668.0 kt	[tiedostoluettelo]