Paketti: phybin (0.3-3)

[ Source: phybin  ]

binning/clustering newick trees by topology

PhyBin is a simple command line tool that classifies a set of Newick tree files by their topology. The purpose of it is to take a large set of tree files and browse through the most common tree topologies.

It can do simple binning of identical trees or more complex clustering based on an all-to-all Robinson-Foulds distance matrix.

phybin produces output files that characterize the size and contents of each bin or cluster (including generating GraphViz-based visual representations of the tree topologies).

Muut pakettiin phybin liittyvät paketit

• dep: libatomic1 (>= 4.8)

  support library providing __atomic built-in functions

• dep: libc6 (>= 2.27) [amd64, arm64]

  GNU-C-kirjasto: jaetut kirjastot
  myös näennäispaketti, jonka toteuttaa libc6-udeb

  dep: libc6 (>= 2.28) [armhf, i386]

• dep: libffi6 (>= 3.0.4) [ei arm64]

  Foreign Function Interface library runtime

  dep: libffi6 (>= 3.2) [arm64]

• dep: libgmp10

  Multiprecision arithmetic library

Imuroi phybin

Imurointi kaikille saataville arkkitehtuureille

Arkkitehtuuri	Paketin koko	Koko asennettuna	Tiedostot
amd64	1,534.7 kt	11,701.0 kt	[tiedostoluettelo]
arm64	1,939.1 kt	14,511.0 kt	[tiedostoluettelo]
armhf	1,779.1 kt	11,932.0 kt	[tiedostoluettelo]
i386	1,562.5 kt	9,141.0 kt	[tiedostoluettelo]