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[ Source: murasaki  ]

Paketti: murasaki (1.68.6-8 ja muut)

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homology detection tool across multiple large genomes

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

Muut pakettiin murasaki liittyvät paketit

  • depends
  • recommends
  • suggests
  • enhances

Imuroi murasaki

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Arkkitehtuuri Versio Paketin koko Koko asennettuna Tiedostot
i386 1.68.6-8+b1 512.8 kt3,197.0 kt [tiedostoluettelo]