Package: libfastahack0 (1.0.0+dfsg-11 and others)

[ Source: libfastahack  ]

library for indexing and sequence extraction from FASTA files (lib)

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

This package contains the dynamic library.

Tags: Role: Shared Library

Other Packages Related to libfastahack0

• dep: libc6 (>= 2.38)

  GNU C Library: Shared libraries
  also a virtual package provided by libc6-udeb

• dep: libgcc-s1 (>= 3.0) [not armel, armhf, riscv64]

  GCC support library

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 13.1)

  GNU Standard C++ Library v3

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Architecture	Version	Package Size	Installed Size	Files
amd64	1.0.0+dfsg-11+b2	25.8 kB	83.0 kB	[list of files]
arm64	1.0.0+dfsg-11+b2	23.1 kB	87.0 kB	[list of files]
armel	1.0.0+dfsg-11+b2	23.6 kB	74.0 kB	[list of files]
armhf	1.0.0+dfsg-11+b2	23.7 kB	58.0 kB	[list of files]
i386	1.0.0+dfsg-11+b2	26.7 kB	78.0 kB	[list of files]
mips64el	1.0.0+dfsg-11+b2	24.0 kB	90.0 kB	[list of files]
ppc64el	1.0.0+dfsg-11+b2	25.8 kB	87.0 kB	[list of files]
riscv64	1.0.0+dfsg-11+b2	23.9 kB	62.0 kB	[list of files]
s390x	1.0.0+dfsg-11+b2	24.6 kB	74.0 kB	[list of files]