Paket: libfastahack0 (1.0.0+dfsg-11 und andere)

[ Quellcode: libfastahack  ]

library for indexing and sequence extraction from FASTA files (lib)

fastahack is a small application for indexing and extracting sequences and subsequences from FASTA files. The included Fasta.cpp library provides a FASTA reader and indexer that can be embedded into applications which would benefit from directly reading subsequences from FASTA files. The library automatically handles index file generation and use.

Features:

 * FASTA index (.fai) generation for FASTA files
 * Sequence extraction
 * Subsequence extraction
 * Sequence statistics (currently only entropy is provided)

Sequence and subsequence extraction use fseek64 to provide fastest-possible extraction without RAM-intensive file loading operations. This makes fastahack a useful tool for bioinformaticists who need to quickly extract many subsequences from a reference FASTA sequence.

This package contains the dynamic library.

Markierungen: Rolle: Laufzeit-Bibliothek

Andere Pakete mit Bezug zu libfastahack0

• dep: libc6 (>= 2.38)

  GNU-C-Bibliothek: Laufzeitbibliotheken
  auch ein virtuelles Paket, bereitgestellt durch libc6-udeb

• dep: libgcc-s1 (>= 3.0) [nicht armel, armhf, riscv64]

  GCC Support-Bibliothek

  dep: libgcc-s1 (>= 3.4) [riscv64]

  dep: libgcc-s1 (>= 3.5) [armel, armhf]

• dep: libstdc++6 (>= 13.1)

  GNU-Implementierung der Standard-C++-Bibliothek (Version 3)

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Download für alle verfügbaren Architekturen

Architektur	Version	Paketgröße	Größe (installiert)	Dateien
amd64	1.0.0+dfsg-11+b2	25,8 kB	83,0 kB	[Liste der Dateien]
arm64	1.0.0+dfsg-11+b2	23,1 kB	87,0 kB	[Liste der Dateien]
armel	1.0.0+dfsg-11+b2	23,6 kB	74,0 kB	[Liste der Dateien]
armhf	1.0.0+dfsg-11+b2	23,7 kB	58,0 kB	[Liste der Dateien]
i386	1.0.0+dfsg-11+b2	26,7 kB	78,0 kB	[Liste der Dateien]
mips64el	1.0.0+dfsg-11+b2	24,0 kB	90,0 kB	[Liste der Dateien]
ppc64el	1.0.0+dfsg-11+b2	25,8 kB	87,0 kB	[Liste der Dateien]
riscv64	1.0.0+dfsg-11+b2	23,9 kB	62,0 kB	[Liste der Dateien]
s390x	1.0.0+dfsg-11+b2	24,6 kB	74,0 kB	[Liste der Dateien]